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Alternative Splicing Gallery

Detail view for swissprot protein HIF1N_MOUSE and isoform Q8BLR9-2

Template: 1yci
Sequence Identity (Template - Swissprot): 0.97619045
Coverage of swissprot protein: 0.96275073

Alignment

HIF1N_MOUSE	MAATAAEVAASGSGEAREEAEAPGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKF
1yci		-------------GEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKF
SSE		-------------CCCCECHHHCCECCCHHHCCCCCCCEEECCEECCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCHHHHHHHCCCCCEEEEEECCCEC
VARSPLIC	                                                                                                    

HIF1N_MOUSE	LYYDEKKMGNFQNFKPRSNREEIKFHEFVEKLQAIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHY
1yci		LYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHY
SSE		CCCCHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEC
VARSPLIC	                                                                                                    

HIF1N_MOUSE	DEQQNFFAQIKGHKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFRNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA
1yci		DEQQNFFAQIKGYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGA
SSE		CCEEEEEEEEECCEEEEEECHHHHHHHCECCCCCCCCCEECCCCCCCCCCCCHHHHCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCEEEEEEEEECC
VARSPLIC	                                        RRRRRRRRRRRRRRRRRRRRRRRDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

HIF1N_MOUSE	PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN
1yci		PTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN
SSE		CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

Varsplic events:
VSP_017538 REMOVE 264-349, affected aminoacids in template: 250-335 Color: Red
VSP_017537 REPLACE 241-263 QVDFDNPDYERFPNFRNVVGYET => GVKRRDQAKRETIAKEKYTKQNK, affected aminoacids in template: 227-249 Color: Green

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