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Alternative Splicing Gallery

Detail view for swissprot protein SOMA_HUMAN and isoform P01241-2

Template: 3hhr
Sequence Identity (Template - Swissprot): 1.0
Coverage of swissprot protein: 0.85253453

Alignment

SOMA_HUMAN	MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLE
3hhr		--------------------------FPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEAYIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLE
SSE		--------------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCHHHCCCHHHHCCCCCCHHHHCCCCHHH
VARSPLIC	                                                         DDDDDDDDDDDDDDD                            

SOMA_HUMAN	LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVE
3hhr		LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFD------DALLKNYGLLYCFRKDMDKVE
SSE		HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC------CHHHHHHHHHHHHHHHHHHHH
VARSPLIC	                                                                                                    

SOMA_HUMAN	TFLRIVQCRSVEGSCG---F--------------------------------------------------------------------------------
3hhr		TFLRIVQCRSVEGSCGEPKFTKCRSPERETFSCHWTDEVHGPIQLFYTRRNEWTQEWKECPDYVSAGENSCYFNSSFTSIWIPYCIKLTSNGGTVDEKCF
SSE		HHHHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCEEEEEEEECCEEEEEEEE
VARSPLIC	                                                                                                    

SOMA_HUMAN	----------------------------------------------------------------------------------------------------
3hhr		SVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYG
SSE		EHHHCECCCCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEECCCCCCEECCCECCCEEEEEEEECCCEEEEEEEEEECCCCCCC
VARSPLIC	                                                                                                    

SOMA_HUMAN	----------------------------------------------------------------------------------------------------
3hhr		EFSEVLYVTLPEPKFTKCRSPERETFSCHWTDEVHGPIQLFYTRRNQEWKECPDYVSAGENSCYFNSSFTSIWIPYCIKLTSNGGTVDEKCFSVDEIVQP
SSE		CCCCCEEEECCCCCEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCEECCCCCCCCCCEEEECHHHCCCCCCEEEEEEECCEEEEEEEECCHHHECC
VARSPLIC	                                                                                                    

SOMA_HUMAN	----------------------------------------------------------------------------------------------------
3hhr		DPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYV
SSE		CCCEEEEEEEEEECCCCCEEEEEEEEECCHHHHCCCCCCCEEEEEEEEECCCCCCEECCCECCCEEEEEEEECCCEEEEEEEEEECCCCCCCCECCCEEE
VARSPLIC	                                                                                                    

SOMA_HUMAN	-----
3hhr		TLPQM
SSE		ECCCC
VARSPLIC	     


Varsplic events:
VSP_006200 REMOVE 58-72, affected aminoacids in template: 31-45 Color: Red



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