print
Sprachauswahl
Benutzermenü
Navigationspfad
Hauptnavigation
Inhalt

Alternative Splicing Gallery

Detail view for swissprot protein TIP30_MOUSE and isoform Q9Z2G9-2

Template: 2fmu
Sequence Identity (Template - Swissprot): 0.9665072
Coverage of swissprot protein: 0.8636364

Alignment

TIP30_MOUSE	MADKEALPKLREDFKMQNKSVFILGASGETGKVLLKEILGQNLFSKVTLIGRRKLTFEEEAYKNVNQEVVDFEKLDVYASAFQGHDVGFCCLGTTRSKAG
2fmu		HHHHHHLPKLREDFKMQNKSVFILGASGETGKVLLKEILGQNLFSKVTLIGRRKLTF----YKNVNQEVVDFEKLDVYASAFQGHDVGFCCLGT---KAG
SSE		CCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCC----CCCCEEEECCHHHHHHHHHHHCCCCEEEECCCC---CCC
VARSPLIC	                                                                                                    

TIP30_MOUSE	AEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSRGADKSSSFLYLQVKGEVEAKVEELKFDRLSVFRPGVLLCDRQESRPGEWLARKFFGSLPDSWASGYA
2fmu		AEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSRGADKSSSFLYLQVKGEVEAKVEELKFDRLSVFRPGVLLCD--------------------SWASGYA
SSE		HHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCEEECC--------------------CHHHHHE
VARSPLIC	 RRRRDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

TIP30_MOUSE	VPVVTVVRAMLNSLVSPSSGQMELLENKAILHLGKDRDVPKL
2fmu		VPVVTVVRAMLNNLVSPSSGQMELLENKAILHLGKD------
SSE		EEHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHCCC------
VARSPLIC	DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

Varsplic events:
VSP_051867 REMOVE 106-242, affected aminoacids in template: 98-208 Color: Red
VSP_051866 REPLACE 102-105 EGFV => VSKK, affected aminoacids in template: 94-97 Color: Green

Servicebereich
Fußzeile